Upstream and downstream (transduction) The upstream signaling pathway is triggered by the binding of a signaling molecule , a ligand , to a receiving molecule, a receptor . Receptors and ligands exist in many different forms, and they will only recognize/bond particular molecules. Upstream extracellular signaling transduce an endless variety of intracellular cascades. Receptors and ligands are common upstream signaling molecules that dictate the downstream elements of the signal pathway . A plethora of different factors affect which ligands bind to which receptors and the downstream cellular response that they initiate.TGF-β The extracellular type II and type I kinase receptors binding to the TGF-β ligands. Transforming growth factor-β is a superfamily of cytokines that play a significant upstream role in regulating of Morphogenesis , Homeostasis , cell proliferation , and differentiation. The significance of TGF-β is apparent with the human diseases that occur when TGF-β processes are disrupted, such as cancer, and skeletal, intestinal and cardiovascular diseases . TGF-β is pleiotropic and multifunctional, meaning they are able to act on a wide variety of cell types .Mechanism The effects of transforming growth factor-β are determined by cellular context. There are three kinds of contextual factors that determine the shape the TGF-β response: the signal transduction components, the transcriptional cofactors and the epigenetic state of the cell. The different ligands and receptors of TGF-β are significant as well in the composition signal transduction pathway . the signal transduction components: ligand isoforms , ligand traps, co-receptors, receptor sub-types, inhibitory SMAD proteins , crosstalk inputs the transcriptional cofactors of SMAD proteins: pluripotency factors, lineage regulators, DNA-binding cofactors , HATs and HDACs , SNF , chromatin readers the epigenetic factors: heterochromatin , pluripotency marks , lineage marks, EMT marks, iPS cell marks, oncogenic marks.Upstream pathway The type II receptors phosphorylate the type I receptors; the type I receptors are then enabled to phosphorylate cytoplasmic R-Smads , which then act as transcriptional regulators . Signaling is initiated by the binding of TGF-β to its serine/threonine receptors. The serene/threonine receptors are the type II and type I receptors on the cell membrane . Binding of a TGF-β members induces assembly of a heterotetrameric complex of two type I and two type II receptors at the plasma membrane . Individual members of the TGF-β family bind to a certain set of characteristic combination of these type I and type II receptors. The type I receptors can be divided into two groups, which depends on the cytoplasmic R-Smads that they bind and phosphorylate. The first group of type I receptors bind and activate the R-Smads, Smad1/5/8. The second group of type I reactors act on the R-Smads, Smad2/3. The phosphorylated R-Smads then form complexes and the signals are funneled through two regulatory Smad channels. After the ligand-receptor complexes phosphorylate the cytoplasmic R-Smads, the signal is then sent through Smad 1/5/8 or Smad 2/3. This leads to the downstream signal cascade and cellular gene targeting .Downstream pathway TGF-β regulates multiple downstream processes and cellular functions. The pathway is highly variable based on cellular context. TGF-β downstream signaling cascade includes regulation of cell growth , cell proliferation, cell differentiation , and apoptosis .
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