Opine


Opines are low molecular weight compounds found in plant crown gall tumors or hairy root tumors produced by pathogenic bacteria of the genus Agrobacterium and Rhizobium. Opine biosynthesis is catalyzed by specific enzymes encoded by genes contained in a small segment of DNA, which is part of the Ti plasmid or Ri plasmid, inserted by the bacterium into the plant genome. The opines are used by the bacterium as an important energy, carbon and nitrogen source. Each strain of Agrobacterium and Rhizobium induces and catabolizes a specific set of opines, this set typifying the Ti plasmid and Ri plasmid. There are some 30 different opines described so far.

Chemical structure

Chemically, opines fall into two major structural classes:
1. The vast majority are secondary amine derivatives resulting from the reduction of the imine formed by condensation of an amino acid, either with a keto acid or a sugar.
The first subcategory includes the opines from the nopaline and octopine families. The nopaline family is formed when alpha-ketoglutarate serves as the keto substrate in the condensation reaction. The octopine family is formed when pyruvate is involved in the condensation reaction.
The second subcategory includes the mannityl family and the chrysopine family formed by the condensation of an amino-acid with mannose.
2. Agrocinopines form a small, separate class of opines. Chemically they are sugar-phosphodiesters. For example, agrocinopine A is a phosphodiester of sucrose and L-arabinose.

Nomenclature

The name opine comes from octopine, the first opine discovered in 1927, not in crown galls, but in octopus muscle. Nopaline comes from the identification of this molecule in tumors that appeared on "nopal", the Spanish and French names of Opuntia spp. cactus. According to Oxford English Dictionary, the word opine was first used in print in 1977. Usually, the name of newly discovered opines has the ending "-opine". Exceptions are nopaline and strombine. On the other hand, not all molecule names ending in "-opine" are opines. For example, atropine, stylopine, europine, and lycopine belong to different classes of molecules.

List of opines

This is an alphabetical list of some opines or opine-like compounds.
;Acetopine
Acetopine was isolated from cotton and soybean callus. It wasn't found in plant tissues transformed by Agrobacterium and therefore it is not considered a "true" opine.
;Agrocinopines
Agrocinopines are a separate class of opines. They are sugar-phosphodiesters. Agrocinopine A is phosphodiester of sucrose and L-Arabinose. Agrocinopine B is the corresponding phosphodiester, in which the glucose has been hydrolyzed from the sucrose portion of agrocinopine A.
;Agropine
Agropine was obtained from crown gall tumors. It is a member of the mannityl family. It is derived from mannopine through the formation of a lactone.
;Agropinic acid
Agropinic acid is produced by crown gall tumors. Belongs to the mannityl family. It is formed by lactamization of agropine.
;Alanopine
Beta-alanopine and meso-alanopine were isolated from marine invertebrates. Structurally it is a member of the octopine family.
;Asparaginopine
See succinamopine
;Chrysopine
Chrysopine was first obtained from fig tree and chrysanthemum crown gall tumors. It is the deoxyfructosyl analog of agropine.
;Cucumopine
Cucumopine was found in grapevine crown gall tumours and carrot hairy-root cultures.
;Epileucinopine
Epileucinopine glutamic acid or N2- was isolated from the poisonous mushroom Clitocybe acromelalga.
;Glutaminopine
Glutaminopine is a member of the nopaline family isolated from crown gall tumors.
;Heliopine
Heliopine was obtained from crown gall tumors.
;Histopine
Histopine is a member of the octopine family found in crown gall tumors.
;Isoleucinopine
Isoleucinopine glutamic acid or N- was isolated from the poisonous mushroom Clitocybe acromelalga.
;Leucinopine
Leucinopine is a member of the nopaline family isolated from crown gall tumors.
;Lysopine
Lysopine is a member of the octopine family found in crown gall tumors.
;Mannopine
Mannopine is found in crown gall tumors. It is the head member of the mannityl family of opines.
;Mannopinic acid
Mannopinic acid was isolated from crown gall tumors. Belongs to the mannityl family.
;Methiopine
Methiopine was found in crown gall tumors.
;Mikimopine
Mikimopine was first isolated from tobacco crow gall tumors.
;Nopaline
Nopaline was first isolated from crown gall tumors. It is the head member of the nopaline family of opines. It was also found in certain nontransformed plant tissues as a result of arginine metabolism
;Nopalinic acid
Nopalinic acid is a member of the nopaline family found in crown gall tumors.
;Octopine
Octopine is the first opine discovered in 1927 in octopus muscle and later in crown gall tumors. It is also found in other cephalopod species and lamellibranchs. It is the head member of the octopine family of opines.
;Octopinic acid
Octopinic acid is a member of the octopine family isolated from crown gall tumors.
;Ornaline
See nopalinic acid
;Phenylalaninopine
Phenylalaninopine was isolated from the poisonous mushroom Clitocybe acromelalga.
;Rideopine
Rideopine is an opine-like molecule derived from putrescine. It is obtained from crown gall tumors.
;Saccharopine
Although not found in crown gall tumors, saccharopine is chemically similar to "true" opines. It is formed by condensation of lysine and alpha-ketoglutarate. Saccharopine is an intermediate in the metabolism of amino acid lysine and occurs in fungi, higher plants and mammals, including man.
;Santhopine
Santhopine is the deoxyfructosyl analog of mannopine. It is a naturally occurring compound found in rotting fruits and vegetables. It was also isolated from crown gall tumors.
;Strombine
Strombine was first isolated from the gastropod mollusk Strombus. It acts as a fish attractant. Structurally it is a member of the octopine family.
;Succinamopine
Succinamopine is a member of the nopaline family isolated from crown gall tumors. Its structure is analogous to that of nopaline, with asparagine replacing arginine.
;Tauropine
Tauropine was found in some marine invertebrates. It is also called rhodoic acid. Structurally it is a member of the octopine family.
;Valinopine
Valinopine glutamic acid or N- was isolated from the poisonous mushroom Clitocybe acromelalga.
;Vitopine
See heliopine