The Rogues were founded in 2012 by Consolidated Sports Holdings International, Inc, based in Scottsdale, Arizona. The chief investor is Bill Yuill, chairman and C.E.O. of The Monarch Corporation of Medicine Hat, Alberta. The president is Gary Gelinas. The first general manager was Chuck Heeman, former G.M. of fellow West Coast League franchise the Klamath Falls Gems. The Rogues replaced the now-defunct Southern Oregon Riverdawgs, who played at Harry & David Field previously.
2014
The Medford Rogues went 26-28 in their 2nd season of WCL play. They missed the play-offs by 5 games behind the wild card leader. Yuto Kata played as a support batter by sacrifice bunting 19 times and setting the WCL record for the most sacrifice bunts by any one batter in one season. Also, Spencer Smith got hit by pitch 18 times setting the record for the most times hit by the pitch by any batter. The Rogues put 41,490 people in the seats in 32 home openings with 1,297 a night.
2015
The Rogues welcomed Ian Church as their new general manager for the 2015 WCL season, replacing Chuck Heeman. On September 23, 2015, the Rogues announced that they would be joining the Great West League, a new collegiate summer league with teams from Oregon and California. They became the sixth team to join the league along with the Chico Heat, Lodi Crushers, Marysville Gold Sox, Portland Pickles and the new Sacramento Stealth.
2016
The Rogues named Carolyn Birch as interim general manager in the spring of 2016. They opened play in the Great West League on June 3, 2016, with a victory over the Portland Pickles. It was also announced that the Rogues will be the inaugural hosts of the annual GWL All-Star Game scheduled for July 25 and 26.
2017
The Rogues finished the regular season at 40-20, their best record in history. But Carolyn Birch stepped down as general manager in the final game of the regular season against Chico on August 5, 2017. Also, Jonathan Kurman took over as play-by-play commentator near season's end after Brian Schnee became news/sports anchor at KTVL News 10. The Rogues took their semi-final series with the Portland Pickles 2 games to one and faced off against their chief rivals the Chico Heat in a rematch of last year's GWL Championship Series. They swept the Heat 5-3 in Game 1 in Chico and 7-2 in Game 2 in Medford to capture their first championship in franchise history dating back to their inaugural season in the WCL in 2013. Following the season, head coach Josh Hogan stepped down to accept the head coaching position. He was replaced by former Oregon State Beavers and Arizona Diamondbacks standout Tyler Graham. In addition, Dave May, was named the team's new Chief Operating Officer.
2018
On October 4, 2018, the Rogues ownership, CSH International, announced that the Rogues are exploring other options with regards to their future as the Great West League ceased operations the same day. On December 12, they announced that they were sold by CSH to local businessman Treg Scott effective December 31 and are joining the Golden StateCollegiate Baseball League.
2019
On January 14, 2019, the Rogues announced the hiring of former St. Mary's High School baseball coach Sean Gallagher as their new head coach. On February 19, 2019, the Rogues announce general manager and COO Dave May had purchased an ownership stake in the team.