The Eurypygiformes' affinities are not very well resolved. They are two families from a Gondwanan lineage of birds. Based on some morphological characteristics, they were initially classed as members of the family Ardeidae, and later the Gruiformes. According to Jarvis, et al.'s 2014 "Whole-genome analyses resolve early branches in the tree of life of modern birds", the group is distantly related to the Phaethontiformes. When seen as a gruiform, the kagu is generally considered related to the extinct adzebills from New Zealand and the sunbittern from Central and South America. Recent studies do indicate that the sunbittern is the closest living relative of the kagu. For example, Fain & Houde found these to be certainly sister taxa and Furo et al. indicated a close phylogenetic relationship between them by cytotaxonomy; they suggest that their common ancestor was separated by the Gondwana vicariance in South America and New Caledonia, respectively. They and the mesites did not group with traditional Gruiformes in their study, but instead with their proposed cladeMetaves, which also includes the hoatzin, pigeons, Caprimulgiformes, flamingos, tropicbirds, Apodiformes, sandgrouse and grebes. The internal structure of this group was not well resolvable by their data, and contains numerous groupings not otherwise corroborated. The usefulness and monophyly of "Metaves" is therefore unclear. Notwithstanding, the kagu and sunbittern – and possibly the adzebills – seem to form a distinct Gondwanan lineage of birds, possibly one order, possibly more, even though the relationships between them, the mesites, and the "core Gruiformes" are not yet resolved. It is notable, however, that the sunbittern and the mesites possess powder down, whereas the "core Gruiformes" do not. While the kagu is the only living species in the family Rhynochetidae, a larger species, the lowland kagu, has been described from Holocenesubfossil remains. The body measurements of this species were 15% greater thanRhynochetos jubatus, with no overlap in measurements except those of the wings. Given that the sites where R. orarius has been found are all lowland sites, and that no fossils of R. jubatus were found in these sites, the scientists who described the fossils suggested they represented highland and lowland species, respectively. R. orarius is one of many species to have become extinct in New Caledonia after the arrival of humans. The validity of the species has been questioned by some authors, but accepted by others. Jarvis's 2014 full-genome analysis of the extant bird orders shows a distant relationship of this group to the tropicbirds, with these two groups together forming the sister group to the "core water birds", or Ardeae. This analysis abandons the Metaves hypothesis. Fossil Messelornithidae once included in Eurypygiformes are now considered the oldest known members of Ralloidea.
