Chromosome 5


Chromosome 5 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 5 spans about 181 million base pairs and represents almost 6% of the total DNA in cells. Chromosome 5 is the 5th largest human chromosome, yet has one of the lowest gene densities. This is partially explained by numerous gene-poor regions that display a remarkable degree of non-coding and syntenic conservation with non-mammalian vertebrates, suggesting they are functionally constrained.
Because chromosome 5 is responsible for many forms of growth and development changes may cause cancers. One example would be acute myeloid leukemia.

Genes

Number of genes

The following are some of the gene count estimates of human chromosome 5. Because researchers use different approaches to genome annotation their predictions of the number of genes on each chromosome varies. Among various projects, the collaborative consensus coding sequence project takes an extremely conservative strategy. So CCDS's gene number prediction represents a lower bound on the total number of human protein-coding genes.
Estimated byProtein-coding genesNon-coding RNA genesPseudogenesSourceRelease date
CCDS8392016-09-08
HGNC7903555742017-05-12
Ensembl8821,2077072017-03-29
UniProt8752018-02-28
NCBI8869817852017-05-19

Gene list

The following is a partial list of genes on human chromosome 5. For complete list, see the link in the infobox on the right.

Diseases and disorders

The following are some of the diseases related to genes located on chromosome 5:
The following conditions are caused by changes in the structure or number of copies of chromosome 5:
Chr.ArmBandISCN
start
ISCN
stop
Basepair
start
Basepair
stop
StainDensity
5p15.330278gneg
5p15.32278401gpos25
5p15.31401555gneg
5p15.2555802gpos50
5p15.1802972gneg
5p14.39721234gpos100
5p14.212341281gneg
5p14.112811543gpos100
5p13.315431836gneg
5p13.218362068gpos25
5p13.120682253gneg
5p1222532407gpos50
5p1124072592acen
5q11.125922839acen
5q11.228393271gneg
5q12.132713518gpos75
5q12.235183580gneg
5q12.335803765gpos75
5q13.137654012gneg
5q13.240124197gpos50
5q13.341974397gneg
5q14.143974752gpos50
5q14.247524907gneg
5q14.349075400gpos100
5q1554005678gneg
5q21.156785879gpos100
5q21.258795987gneg
5q21.359876295gpos100
5q22.162956419gneg
5q22.264196527gpos50
5q22.365276666gneg
5q23.166666943gpos100
5q23.269437267gneg
5q23.372677468gpos100
5q31.174687807gneg
5q31.278078008gpos25
5q31.380088316gneg
5q3283168625gpos75
5q33.186258887gneg
5q33.288879072gpos50
5q33.390729304gneg
5q3493049690gpos100
5q35.196909952gneg
5q35.2995210183gpos25
5q35.31018310600gneg