Following the events of "Ragtag", Coulson, May, Skye and Triplett are attacked by several Centipede soldiers and a Hydra operative wielding the Berserker staff in a Cuban Hydra base. After Skye activates her Trojan virus within Hydra's computer systems so the team can uncover their plans, May uses the staff to collapse the base and bury the Hydra agents. Trapped on the ocean floor, Fitz and Simmons send out a distress signal, and devise a controlled explosive to blow the windows open and escape. Fitz forces a distraught Simmons to take the sole oxygen tank, professing his feelings for her. He is nearly drowned after using the explosive, while Simmons swims to the surface with his unconscious body, where they are rescued by Nick Fury, who picked up their distress signal. Fitz survives, but sustains damage to his temporal lobe as a result of oxygen deprivation and is left comatose. After being saved from death by Raina's synthesized GH325, Garrett begins exhibiting the super-strength given by the Centipede serum, as well as the manic behavior and hypergraphia caused by GH325, and the symbols he carves resemble those found by Ward in the Todorov Building in Minsk. Coulson, May, Skye and Triplett use the Trojan to locate the new Cybertek facility, and launch an assault while Quinn is giving some military generals a tour. Hearing the gunfire, the generals demand to know the situation, and an annoyed Garrett murders one of them. A panicked Quinn flees with the gravitonium, along with Raina. Ward tries to capture Skye, but is attacked and incapacitated by May, while Skye releases prisoners Hydra took to coerce the Cybertek staff and Centipede soldiers into doing their bidding, including Ace Peterson. Fury arrives and provides Coulson with the Destroyer gun, which he uses to take out the remaining Centipede soldiers, before they confront Garrett and Peterson. Skye sends Peterson a message from Ace through his eye implant, and Peterson, realizing Ace is safe, fires a missile at Garrett and then kills him with his cybernetic leg. In the aftermath, the Centipede soldiers are arrested by the military, Coulson takes Ward captive, and Peterson, unable to face his son, leaves to seek redemption for his crimes. The GH325 in Garrett's blood revives him, and he uses Cybertek machinery to upgrade into an advanced Deathlok, but Coulson vaporizes him with the Peruvian Tesseract weapon. Coulson criticizes Fury for using GH325 to revive him, but Fury asserts that he values Coulson as much as any Avenger, because he represents the heart and moral center of SHIELD. He then declares Coulson the new director of SHIELD, tasking him with rebuilding the organization from scratch, and equips him with a 'toolbox' containing useful data. Under cover of his apparent death, Fury heads to eastern Europe to continue hunting Hydra, while Coulson, May, Skye and Triplett use co-ordinates in the toolbox to locate another secret base, the Playground, where they reunite with Simmons and meet Billy Koenig, the deceased Eric's identical brother. Elsewhere, Raina meets with Skye's father, 'the Doctor'. In an end tag, Coulson begins experiencing hypergraphic episodes as a belated side effect of the GH325.
Production
Development
In April 2014, Marvel revealed that the twenty-second episode would be titled "Beginning of the End", and would be written by executive producers Maurissa Tancharoen and Jed Whedon, with David Straiton directing.
Casting
In April 2014, Marvel revealed that main cast members Clark Gregg, Ming-Na Wen, Brett Dalton, Chloe Bennet, Iain De Caestecker, and Elizabeth Henstridge would star as Phil Coulson, Melinda May, Grant Ward, Skye, Leo Fitz, and Jemma Simmons, respectively. It was also revealed that the guest cast for the episode would include Bill Paxton as Agent Garrett, J. August Richards as Mike Peterson/Deathlok, B.J. Britt as Agent Triplett, Ruth Negga as Raina, David Conrad as Ian Quinn, Glenn Morshower as General Jacobs, Josh Daugherty as Kyle Zeller, Patton Oswalt as Koenig, Mark Berry as Admiral Jolnes, Jeffrey Muller as Kaminsky, Ajani Wrighster as Ace, Asif Ali as Jesse Fletcher, Kyla Garcia as Mrs. Zeller, Nicole J. Butler as Aunt Mindy and Cynthia Rose Hall as employee. Oswalt, Berry, Muller, Wrighster, Ali, Garcia, Butler, and Hall did not receive guest star credit in the episode. Paxton, Richards, Britt, Negga, Conrad, and Morshower reprise their roles from earlier in the series. Samuel L. Jackson makes a special guest appearance as Nick Fury, reprising his role from the films.
In his appearance, Jackson's Fury wields a version of the gun that Coulson used in Marvel's The Avengers.
Release
Broadcast
"Beginning of the End" was first aired in the United States on ABC on May 13, 2014.
Marketing
For the final six episodes, Marvel began the "Marvel’s Agents of S.H.I.E.L.D.: The Art of Level Seven" initiative, in which a different image was released each Thursday before a new episode, depicting a first look at a key event from the upcoming episode. Bell stated that the initiative was a way to tie the series back to its comics roots, and was thought of at the beginning of the season. The production team tried to pair specific artists to the teaser posters based on their previous work and how it connected to the themes and emotion of the intended episode. The poster for "Beginning of the End", created by Phantom City Creative, is reminiscent of the first official poster released, with differences including the characters' order and clothing, the poster's coloring, a broken S.H.I.E.L.D. logo over Hydra's, and Ward being tinted by Hydra.
Home media
The episode, along with the rest of Agents of S.H.I.E.L.D.s first season, was released on Blu-ray and DVD on September 9, 2014. Bonus features include behind-the-scenes featurettes, audio commentary, deleted scenes, and a blooper reel. On November 20, 2014, the episode became available for streaming on Netflix.
Reception
Ratings
In the United States the episode received a 2.0/7 percent share among adults between the ages of 18 and 49, meaning that it was seen by 2.0 percent of all households, and 7 percent of all of those watching television at the time of the broadcast. It was watched by 5.45 million viewers.