Bürgi–Dunitz angle


The Bürgi–Dunitz angle is one of two angles that fully define the geometry of "attack" of a nucleophile on a trigonal unsaturated center in a molecule, originally the carbonyl center in an organic ketone, but now extending to aldehyde, ester, and amide carbonyls, and to alkenes as well. Precisely, in the case of nucleophilic attack at a carbonyl, it is defined as the Nu-C-O bond angle, where Nu is the atom of the nucleophile forming the bond with the carbon atom. The angle was named after crystallographers Hans-Beat Bürgi and Jack D. Dunitz, its first senior investigators. The second angle defining the geometry describes the "offset" of the nucleophile's approach toward one of the two substituents attached to the carbonyl carbon or other electrophilic center, and was named the Flippin–Lodge angle by Clayton Heathcock after his contributing collaborators Lee A. Flippin and Eric P. Lodge. These angles are generally best construed to mean the angle observed or measured for a given system, and not the historically observed value range for the original Bürgi–Dunitz aminoketones, or an idealized value computed for a particular system. I.e., the BD and FL angles of the hydride-formadehyde system have one pair of values, while the angles observed for other systems are expected to vary.
The BD angle adopted during an approach by a nucleophile to a trigonal unsaturated electrophile depends primarily on the molecular orbital shapes and occupancies of the unsaturated center, and only secondarily on the molecular orbitals of the nucleophile. Original measurements for a series of intramolecular amine-carbonyl ketone interactions observed in crystals of compounds bearing both functionalities—e.g., methadone and protopine, images at left and right, below—gave a narrow range of BD angle values. Corresponding computational estimates on the approach of the s-orbital of the hydride anion to the pi-system of the simplest aldehyde, formaldehyde, gave a BD angle value of 107°. Both the crystallographic measurement for aminoketones and the computational estimated for this simplest system are quite close to the theoretical ideal of a tetrahedral angle, consistent with the importance of this geometry in developing transition states in nucleophilic attacks at trigonal centers.
The convergence of observed BD angles can be viewed as arising from the need to maximize overlap between the highest occupied MO of the nucleophile, and the lowest unoccupied MO of the unsaturated, trigonal center of the electrophile. In the case of addition to a carbonyl, the HOMO is often a p-type orbital as shown in the figure, and the LUMO is generally understood to be the antibonding π* MO perpendicular to the plane containing the ketone C=O bond and its substituents. The BD angle observed for nucleophilic attack is believed to approach the angle that would produce optimal overlap between HOMO and LUMO. At the same time, the nucleophile avoids overlap with other orbitals of the electrophilic group that are unfavorable for bond formation.
To understand cases of real chemical reactions, this HOMO-LUMO-centered view has to be modified by an understanding of further complex, electrophile-specific repulsive and attractive electrostatic and van der Waals interactions that alter the BD angle, and bias the Flippin-Lodge angle toward one substituent or the other. In addition, any dynamics at play in the system have to be taken into account in real cases. Moreover, it appears likely that in constrained environments the BD angles for reactivity will be quite distinct, since normal orbital overlap principles assuming reactivity dependent on random collision are not applicable in simple fashion. For instance, the BD value determined for enzymatic cleavage of an amide by the serine protease subtilisin was 88°, and a careful compilation of literature crystallographic BD angle values clustered at 89 ± 7° for the same reaction mediated by different catalysts. At the same time, the subtilisin FL value was 8°, see the Flippin–Lodge angle article, and FL angle values from the careful compilation clustered at 4 ± 6°.
The Bürgi–Dunitz and Flippin–Lodge angles were central to the development of understanding of asymmetric induction during nucleophilic attack at hindered carbonyl centers. As well, the stereoelectronic principles that underlie nucleophiles adopting a proscribed range of Bürgi–Dunitz angles appears to contribute to the conformational stability of proteins and are invoked to explain the stability of particular conformations of molecules in one hypothesis of a chemical origin of life.